Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888074.1_cds_XP_016442596.1_37842
CDS Infomation

[gene=LOC107768012] [db_xref=GeneID:107768012] [protein=probable serine/threonine-protein kinase At1g54610] [protein_id=XP_016442596.1] [location=join(5048..5461,6188..6472,6805..7122,8162..8389,8686..8786,8943..9057,9597..10067,10158..10364)] [gbkey=CDS]
Sequence

ATGGGGTGTGTTTGTGGTAAGCCCTCTGCCATTGAAGACAGTAGAGATAGTCCAAGGGAC
AGGTTGTCAAGTAAAAATGCTGCAACTTTGAGAGGGCCAAGGGCTGGTTCATCAAGAAGG
GAGGACGCAGCTTATAGGGTTAAAGATCGCTTGGATAGCATTGATGGGAAGGCAATGCTG
ATTGATAAACAAGTAAATGGTTCTGTAAGATTGCAGGGTGATAATTATGAGAGGAAAAGG
GAGAAGCAAGAGTTTATTGTTGCTACACATCATCCTGGAATTGGGATATTACCTAAAGGG
AGTGAAGGGGAACAGGTTGCTGCTGGATGGCCACCTTGGCTTGCTGCTGTTGCTGGTGAA
GCTATCAGAGGATGGGTGCCGAGGCGAGCTGATTCTTTTGAGAAGTTGGATAAAATTGGT
CAGGGCACCTACAGCAATGTTTACCGTGCTCGTGATCTTGATCAAGGGAAGATCGTCGCT
TTGAAGAAAGTGAGATTTGATAACCTAGAACCTGAGAGTGTTCGGTTCATGGCGAGGGAG
ATTCACATACTACGGAGGCTTGATCATCCAAACATAATAAAATTAGAAGGTTTAGTTACT
TCTAGGATGTCTTGCAGCCTATACCTTGTATTTGAGTACATGGAGCATGATTTGGCAGGG
CTAGCGTCACACCCTGGTCTTAAGTTTACTGAGTCACAGGTCAAATGTTACATGCAGCAA
CTTTTACGTGGACTTGATCATTGTCACAGTCGTGGTGTTCTACATCGTGATATAAAAGGC
TCCAACCTTTTAATTGACAATAATGGCATATTGAAGATTGCTGATTTTGGTCTTGCTAGC
TTTTTCGATCCGCATCAAAGCCAGCCTCTCACTAGCCGTGTAGTGACTCTCTGGTATCGG
CCTCCTGAACTGCTACTCGGTGCTACTTACTATGGGACTGCTGTGGATTTGTGGAGCACT
GGTTGCATACTTGCGGAACTTTATGCTGGCAAGCCGATAATGCCTGGGAGAACAGAGGTT
GAGCAGCTTCATAAGATCTTCAAACTGTGTGGATCACCTTCTGAGGAGTACTGGAGGAAA
TCGAGGTTGCCCCATGCAACAATCTTCAAGCCCCAACAACCTTATCGGCGTTGTGTTGCG
GAAACATTTAAAGAGTTTCCTGCACCAGCACTAGCACTCATAGAAACCTTACTTTCCATA
GATCCTGCCGATCGTGGGTCATCAGCCTCTGCCTTGAAGAGTGAGTTCTTTACAACAAAG
CCGCTCCCTTGTGATCCTTTGAGCTTGCCAAAATATCCTCCGAGCAAGGAATTTGATGCT
AAAGTGCGGGATGAAGAAGCTCGAAGGCAAGCGGCAGCTGGAAACAAGGGTCCCAGATAT
GACCTAGAAAGGAGAGGAACAAGAGAATCGCGTGCAGTCCCTGCACCCGAAGCCAATGCT
GAATTAGTTTCGTCTATGCAGAAAAGGCAAGGTCAATCCAATTCAAAAAGCAGAAGTGAG
ATGTTCAACTCTCATCAGGAAGAAGTTGCATCTGGTTTTCCAATTGATCCCCCTCGACCA
TCTCAGGTTGTGGAAGAAGCAAGCAATGATCCTCAGGCGCAGCTGCATAAGCGAGGTTCA
CATTCCGGGCCATTGGCTCACCGAGCTGCCTGGGCAAAAGCTGGAAAGAATATGGAAGAT
GCCCCGAAACTCTCTGTTGCGGATTTGTCAGCTATGTCCGGTCTAGTCGCTGCAAGGAGA
AGCATGTTCTCTGAAGACCGGCCAGACAAGTCTGGTCCACATAAACAAGAGGCTCCTAAA
CTTATAGCCAGGTTTCCTGGATCATTCAAAGAGGTTTCACATTCCGCGATGAAACAAGAG
CAGAAAACTCATTCACTTGCGAGCTCACATCAAAATGAGGACGGTAGAACTAGCAACAAT
GATCCTGTTCTTCTGGGATATGGATCAAAAGGCAACAAAATTCACTATTCTGGGCCACTA
CTAGTTCCATCAGGCAAAATGGATCAGATGTTGAAAGATCACGATCGCCATGTCCAAGAA
GCTGTAAGACGGGCACGCTTGGACAAGGCAAAAGCTAAGAAAATTCAGATTGAAGGGAAC
CAATTATCAGCCAATTCATTATTTGTTTCTGGCCGTTGA

Peptide Sequence

PEP ID

XP_016442596.1
PEP Infomation

PREDICTED: probable serine/threonine-protein kinase At1g54610 [Nicotiana tabacum]
Sequence

MGCVCGKPSAIEDSRDSPRDRLSSKNAATLRGPRAGSSRREDAAYRVKDRLDSIDGKAML
IDKQVNGSVRLQGDNYERKREKQEFIVATHHPGIGILPKGSEGEQVAAGWPPWLAAVAGE
AIRGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQGKIVALKKVRFDNLEPESVRFMARE
IHILRRLDHPNIIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFTESQVKCYMQQ
LLRGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFFDPHQSQPLTSRVVTLWYR
PPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWRK
SRLPHATIFKPQQPYRRCVAETFKEFPAPALALIETLLSIDPADRGSSASALKSEFFTTK
PLPCDPLSLPKYPPSKEFDAKVRDEEARRQAAAGNKGPRYDLERRGTRESRAVPAPEANA
ELVSSMQKRQGQSNSKSRSEMFNSHQEEVASGFPIDPPRPSQVVEEASNDPQAQLHKRGS
HSGPLAHRAAWAKAGKNMEDAPKLSVADLSAMSGLVAARRSMFSEDRPDKSGPHKQEAPK
LIARFPGSFKEVSHSAMKQEQKTHSLASSHQNEDGRTSNNDPVLLGYGSKGNKIHYSGPL
LVPSGKMDQMLKDHDRHVQEAVRRARLDKAKAKKIQIEGNQLSANSLFVSGR

Transcript Sequence

Gene sequence data has not been registered.